proteinGroups {MSstatsTMT} | R Documentation

## Example of proteinGroups file from MaxQuant for TMT-10plex experiments.

### Description

Example of proteinGroup.txt file from MaxQuant, which is identified protein group information file. It is the input for MaxQtoMSstatsTMTFormat function, with evidence.txt and annotation file. It includes identified protein groups for 10 proteins among 15 MS runs with TMT10. The important variables are as follows:

### Usage

    proteinGroups

### Format

A data frame with 1075 rows and 105 variables.

### Details

- id

- Protein.IDs

- Only.identified.by.site

- Potential.contaminant

- Reverse

### Examples

    head(proteinGroups)

[Package MSstatsTMT version 1.1.2 Index]