codonSumsPerGroup {ORFik} | R Documentation

## Get hits per codon

### Description

Helper for entropy function, normally not used directly Seperate each group into tuples (abstract codons) Gives sum for each tuple within each group Example: c(1,0,0,1), with reg_len = 2, gives c(1,0) and c(0,1), these are summed and returned as list

### Usage

    codonSumsPerGroup(countList, reg_len, runLengths)

### Arguments

`countList` | a Rle of count repetitions (000,1,00,1 etc)
`reg_len` | integer vector, size of runs
`runLengths` | integer vector, duplications per run

### Value

a list of codon sums

[Package ORFik version 1.2.1 Index]