bedToGR {ORFik} | R Documentation

## Converts different type of files to Granges

### Description

column 5 will be set to score Only Accepts bed files for now, standard format from Fantom5

### Usage

    bedToGR(x, bed6 = TRUE)

### Arguments

`x` | An data.frame from imported bed-file, to convert to GRanges
`bed6` | If bed6, no meta column is added

### Value

a GRanges object from bed

### See Also

Other utils: `convertToOneBasedRanges`, `findFa`, `fread.bed`, `is.gr_or_grl`, `is.grl`, `validGRL`

[Package ORFik version 1.2.1 Index]