downstreamFromPerGroup {ORFik} | R Documentation

## Get rest of objects downstream (inclusive)

### Description

Per group get the part downstream of position. downstreamFromPerGroup(tx, startSites(threeUTRs, asGR = TRUE)) will return the 3' utrs per transcript as GRangesList, usually used for interesting parts of the transcripts.

### Usage

    downstreamFromPerGroup(tx, downstreamFrom)

### Arguments

`tx` | a `GRangesList`, usually of Transcripts to be changed
`downstreamFrom` | a vector of integers, for each group in tx, where is the new start point of first valid exon.

### Details

If you don't want to include the points given in the region, use `downstreamOfPerGroup`

### Value

a GRangesList of downstream part

### See Also

Other GRanges: `assignFirstExonsStartSite`, `assignLastExonsStopSite`, `downstreamOfPerGroup`, `upstreamFromPerGroup`, `upstreamOfPerGroup`

[Package ORFik version 1.2.1 Index]