findHealthy {Onassis} | R Documentation

## `findHealthy`

### Description

findHealthy annotates as 'Healthy' the samples whose metadata matches with one of the elements of a list of sentence used to describe the normal disease state or healthy.

### Usage

    findHealthy(metadata_df)

### Arguments

`metadata_df` | a data frame where the first column corresponds to the identifier of a sample #' and the other columns the metadata relative to the sample

### Value

a data frame with healthy samples annotated as 'Healthy'

### Examples

    metadatafile <- readRDS(system.file('extdata', 'vignette_data',
    'GEO_human_chip.rds', package='Onassis'))

    healthy_gsms <- findHealthy(metadatafile)

[Package Onassis version 1.4.5 Index]