84e60024b80dbe4fdd18cf20efd1a6a3 *CITATION
e22e683da215c024049f365ae0d78ac4 *DESCRIPTION
42d42be6e99e9f67bc56cd6d355cf4c9 *INDEX
2d0fdc1a2262af47071129a11510a20f *Meta/Rd.rds
77a30dbd9a48297ae6e6ef2194a95267 *Meta/features.rds
49edee06317670395b68be0ddd8e7942 *Meta/hsearch.rds
a79fa25bc1e243fec22ecabf368a1418 *Meta/links.rds
88f482a7cc9d88418aeac6b4b38717ea *Meta/nsInfo.rds
7ce1f8129dd3ea1add1c09b2fdeb637e *Meta/package.rds
645f9479b3c9818d95a39f42a5e0e6de *Meta/vignette.rds
30ca56490fce18ceb59bc564f7150498 *NAMESPACE
a2efa18c59a8829a9330b088ebc11401 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/PGA
af3ea9ae4c19f109ba4870cf4d71ba28 *R/PGA.rdb
752859843c26c6f2115389616575f417 *R/PGA.rdx
da744d2fd1ce9ea8082ead76055bd1ee *doc/PGA.R
8fe205eac3dc953585f2beca1bc4a2d2 *doc/PGA.Rnw
7967c29a6772178cb066fc50b062de10 *doc/PGA.pdf
16e7a0c32c71426f0506a334612eb607 *doc/index.html
d2d3001867978814dbb4f00d42de4619 *extdata/annotation/exon_anno.RData
9dada94eeb9674f03ed9b635c52cba72 *extdata/annotation/ids.RData
db7bedb40cc3d176b8adcb26cd2b7dc4 *extdata/annotation/procodingseq.RData
d1736ea15c31f160d149ed72a3e0baed *extdata/annotation/proseq.RData
b628aedf208c94ce986553216beb0e64 *extdata/annotation/splicemax.RData
90e65f32186a16153d5eec36bec09147 *extdata/annotation/txdb.sqlite
3aafce959a5cf5cdf207215ec236bbe2 *extdata/input/PGA.vcf
51fc19ac042cc844740c53b8d9cdf5ec *extdata/input/Trinity.fasta
671180bb64135edd17d9aa1e9e943063 *extdata/input/junctions.bed
9dff2ad9f7ff0e0eb8e05242ad5d8950 *extdata/input/mascot.dat
a9121d2732844083edb4558ab53cfb1d *extdata/input/msgfplus.mzid
1268f9781323037abfb7413176f8d76d *extdata/input/pga.mgf
8552639adf7bd23addfbb4dab285c0cd *extdata/input/transcripts.gtf
33a35a40884fa542ed1ece55ef46e372 *help/AnIndex
8cb33d07e30df5d8c5b0ad7fb760da65 *help/PGA.rdb
0741e45a7e0dcb8274bbec0729620437 *help/PGA.rdx
2cc86019532f5e6689191ab45d5825d7 *help/aliases.rds
cb783cde950072c7a5b2f4d3c5f34dfe *help/paths.rds
bea46c646f6fe42dc591e39f211becf5 *html/00Index.html
fd99d1b2a467642615497c641b68a763 *html/PrepareAnnotationEnsembl2.html
467b5a29eaed00373b507db3eb224840 *html/PrepareAnnotationRefseq2.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
aeef9d8a0b8d8a5e1145f632d39325d4 *html/addGeneName4Ensembl.html
929b98a80692f7c72f8acffce88a4962 *html/createProDB4DenovoRNASeq.html
6c59798c15f2cdac2722d3fe1418f9c2 *html/dbCreator.html
748b0cdf105e811e0e8dd95943e19851 *html/easyRun.html
32f4852d230f0c8bdecdb029130a8cba *html/parserGear.html
e8b38891f6e8403790e524d9d38e4313 *html/reportGear.html
d601d37d8008d32239a0d164e6df18e3 *html/runTandem.html
912baa3efd6bd570df218f6072007c34 *parser4PGA.jar
720b2a86b21fa0eacbaf1abdbdf455ec *unitTests/test_check_parser.R
