scanSmc {PGSEA} | R Documentation

## Scan through smc objects

### Description

This function scans through smc objects and returns those with specified attributes.

### Usage

    scanSmc(smcList, scanSlot = "private", scanFor = "no")

### Arguments

`smcList` | list of "smc" objects
`scanSlot` | character - which smc slot to investigate
`scanFor` | character - what character string to look for

### Value

a list of "smc" objects with the desired attribute

### Author(s)

Karl Dykema <karl.dykema@vai.org>

### Examples

    datadir <- system.file("extdata", package = "PGSEA")
    sample <- readGmt(file.path(datadir, "sample.gmt"))
    sample[1:2] <- editSmc(sample[1:2],"creator","Joe Smith")

    scanned <- scanSmc(sample,"creator","Joe Smith")

    str(scanned)

[Package PGSEA version 1.56.0 Index]