PureCN-defunct {PureCN} | R Documentation

## Defunct functions in package ‘PureCN’

### Description

These functions are defunct and no longer available.

### Details

The following functions are defunct; use the replacement indicated below:

- autoCurateResults: no replacement

- calculateGCContentByInterval: `preprocessIntervals`

- createExonWeightFile: `calculateIntervalWeights`

- createSNPBlacklist: `setMappingBiasVcf`

- findBestNormal: `calculateTangentNormal`

- getDiploid: no replacement

- plotBestNormal: no replacement

- readCoverageGatk: `readCoverageFile`

[Package PureCN version 1.12.2 Index]