featureDataAmp {R453Plus1Toolbox} | R Documentation

## Access the amplicon data of an AVASet

### Description

Similar to `featureData` of the Biobase ExpressionSet, this function returns the feature data and feature meta of the amplicon slot of an instance of the AVASet.

### Usage

        featureDataAmp(object)

### Arguments

`object` | An `link{AVASet-class}` object.

### Value

The feature data of the amplicon slot contains the names, primers, start/end positions and reference sequences of all amplicons (see `AVASet-class` for details). The returned object is of class `AnnotatedDataFrame`.

### Author(s)

Christoph Bartenhagen

### See Also

`fDataAmp`, `assayDataAmp`, `AVASet-class`,

### Examples

        # load an AVA dataset containing 6 samples, 4 amplicons and 259 variants
        data(avaSetExample)
        avaSetExample

        # show contents amplicon feature data
        featureDataAmp(avaSetExample)

[Package R453Plus1Toolbox version 1.32.0 Index]