intScores {RTopper} | R Documentation

## A list of genomic scores integrated across distinct data sets to be used to run the examples in the RTopper package

### Description

A `list` containing a named `numeric` vector corresponding to the genomic score resulting from the integration across distinct data set. These integrated gene-to-phenotype scores are computed by the `computeDrStat` function. Can be used as input to `runBatchGSE`.

### Usage

     data(intScores)

### Format

This object is a `list` of length one:

`"integrated"`: a `numeric` vector of length 500, corresponding to the integrated phenotype association scores computed for each of the 500 genes used in the examples;

### Source

Computed using the `computeDrStat` function from the TCGA data contained in `dat` and `pheno`.

### Examples

    data(intScores)
    class(intScores)
    names(intScores)
    str(intScores)

[Package RTopper version 1.28.0 Index]