get.covg.thres,RnBDiffMeth-method {RnBeads} | R Documentation

## get.covg.thres-methods

### Description

Gets the coverage threshold employed for obtaining statistics in the differential methylation tables

### Usage

    ## S4 method for signature 'RnBDiffMeth'
    get.covg.thres(object)

### Arguments

`object` | RnBDiffMeth object

### Value

integer coverage threshold

### Author(s)

Fabian Mueller

### Examples

    library(RnBeads.hg19)
    data(small.example.object)
    logger.start(fname=NA)
    dm <- rnb.execute.computeDiffMeth(rnb.set.example,pheno.cols=c("Sample_Group","Treatment"))
    get.covg.thres(dm)

[Package RnBeads version 2.0.1 Index]