Package: SPLINTER
Type: Package
Title: Splice Interpreter Of Transcripts
Version: 1.8.1
Date: 2018-10-15
Authors@R: c(person("Diana", "Low", role = c("aut", "cre"),email =
        "dlow@imcb.a-star.edu.sg"))
Author: Diana Low
Maintainer: Diana Low <dlow@imcb.a-star.edu.sg>
Description: SPLINTER provides tools to analyze alternative splicing
        sites, interpret outcomes based on sequence information, select
        and design primers for site validiation and give visual
        representation of the event to guide downstream experiments.
License: GPL-2
LazyData: TRUE
Depends: R (>= 3.4.0), grDevices, stats
Imports: graphics, ggplot2, seqLogo, Biostrings, biomaRt,
        GenomicAlignments, GenomicRanges, GenomicFeatures, Gviz,
        IRanges, S4Vectors, GenomeInfoDb, utils, plyr,stringr, methods,
        BSgenome.Mmusculus.UCSC.mm9, googleVis
biocViews: ImmunoOncology, GeneExpression, RNASeq, Visualization,
        AlternativeSplicing
Collate: primerpcr.R main_splinter.R
Encoding: UTF-8
RoxygenNote: 6.1.0
VignetteBuilder: knitr
Suggests: BiocStyle, knitr, rmarkdown
git_url: https://git.bioconductor.org/packages/SPLINTER
git_branch: RELEASE_3_8
git_last_commit: c0320af
git_last_commit_date: 2019-01-04
Date/Publication: 2019-01-04
NeedsCompilation: no
Packaged: 2019-01-05 04:13:40 UTC; biocbuild
Built: R 3.5.2; ; 2019-01-05 12:44:48 UTC; windows
