ppie.compPij {STRINGdb} | R Documentation

## ppie.compPij

### Description

Compute the pvalue of protein I to interact with protein J (look at the Pradines paper referenced below)

### Usage

    ppie.compPij(degI, degJ, edgeNum)

### Arguments

`degI` | degree of protein I
`degJ` | degree of protein J
`edgeNum` | total number of edges of the entire graph

### Value

return the pvalue of protein I to interact with protein J (look at the Pradines paper referenced below)

### Author(s)

Andrea Franceschini

### References

Pradines JR, Farutin V, Rowley S, Dancik V. Analyzing protein lists with large networks: edge-count probabilities in random graphs with given expected degrees. J. Comput. Biol. 2005;12:113-128. Franceschini, A et al. (2013). STRING v9.1: protein-protein interaction networks, with increased coverage and integration. In:Nucleic Acids Res. 2013 Jan;41(Database issue)

[Package STRINGdb version 1.22.0 Index]