performanceMetrics {SummarizedBenchmark} | R Documentation

## Accessor and replacement functions for the slot 'performanceMetrics' of a SummarizedBenchmark object.

### Description

Accessor and replacement functions for the slot 'performanceMetrics' of a SummarizedBenchmark object.

### Usage

    performanceMetrics(object, ...)

    performanceMetrics(object, ...) <- value

    ## S4 method for signature 'SummarizedBenchmark'
    performanceMetrics(object, assay = NULL)

      ## S4 replacement method for signature 'SummarizedBenchmark,SimpleList'
    performanceMetrics(object) <- value

### Arguments

`object` | a `SummarizedBenchmark` object.
`...` | Futher arguments, perhaps used by methods
`value` | A SimpleList of the same length as the number of assays
`assay` | A character string indicating an assay name

### Value

A SimpleList with one element for each assay. Each element of the list contains a list of performance functions.

### Author(s)

Alejandro Reyes

### See Also

`addPerformanceMetric`, `estimatePerformanceMetrics`

### Examples

    data( sb )
    performanceMetrics( sb )
    performanceMetrics( sb, assay="qvalue" )
    performanceMetrics( sb ) <- SimpleList( qvalue=list(), logFC=list() )

[Package SummarizedBenchmark version 2.0.1 Index]