TEList {TarSeqQC} | R Documentation

## A set of two amplicon panels example for use the TarSeqQC R package.

### Description

A non-real dataset containing amplicon sequencing results to test the TarSeqQC package, principally the use of the TargetExperimentList class.

### Format

A TargetExperimentList object

### Details

bedFile

  Bed file containing 29 amplicons and 8 genes.

panels

  GRanges obtaining amplicon coverage for two targeted sequencing experiment performed using the same bed file

feature

  Character "amplicon" indicating that the analyzed features are amplicon sequences

attribute

  Character "coverage"

### Author(s)

Gabriela A. Merino gmerino@bdmg.com.ar, Cristobal Fresno cfresno@bdmg.com.ar, Yanina Murua ymurua@leloir.org.ar, Andrea S. Llera allera@leloir.org.ar and Elmer A. Fernandez efernandez@bdmg.com.ar

### Source

see `TargetExperimentList-class`

### See Also

Other TargetExperimentList: `TargetExperimentList-class`, `TargetExperimentList`, `initialize,TargetExperimentList-method`

[Package TarSeqQC version 1.12.0 Index]