TVResults-class {TransView} | R Documentation

## Class `"TVResults"`

### Description

Container holding the results of a call to `plotTV()`.

### Objects from the Class

Objects are created by the function `plotTV()` using an internal constructor.

### Accessors

tvr represents a `"TVResults"` instance in the following

`parameters(tvr)`:

  Holds all parameters used to call plotTV

`clusters(tvr)`:

  Returns numeric vector with the clsuter of each cluster.

`cluster_order(tvr)`:

  Ordering of the rows within the original regions passed to plotTV with regard to the clusters.

`scores_peaks(tvr)`:

  Scores of the peaks. Corresponds to the values within the plot after interpolation and normalization.

`scores_rna(tvr)`:

  Scores of the transcripts. Corresponds to the values within the plot after interpolation and normalization.

`summaryTV(tvr)`:

  Returns a data frame with the clustering results of the internal data.

### Convenience Methods

plotTVData

  `signature(tvr = "TVResults")`: Returns a data frame with summarized clustering results.

### Note

Not all slots are currently being exported.

### Author(s)

Julius Muller ju-mu@alumni.ethz.ch

### See Also

`plotTVData-methods`

### Examples

    showClass("TVResults")

[Package TransView version 1.26.1 Index]