Package: Ularcirc
Type: Package
Title: Shiny app for canonical and back splicing analysis (i.e.
        circular and mRNA analysis)
Version: 1.0.0
Authors@R: person ("David", "Humphreys", email="d.humphreys@victorchang.edu.au", 
      role = c("aut","cre"))
Description: Ularcirc reads in STAR aligned splice junction files and provides
    visualisation and analysis tools for splicing analysis. Users can assess
    backsplice junctions and forward canonical junctions.
biocViews: DataRepresentation,Visualization, Genetics, Sequencing,
        Annotation, Coverage, AlternativeSplicing, DifferentialSplicing
License: file LICENSE
Encoding: UTF-8
LazyData: true
Depends: R (>= 3.5.0)
Imports: data.table (>= 1.9.4), shiny, shinyFiles, gsubfn, Biostrings,
        GenomicFeatures, GenomeInfoDb, GenomeInfoDbData, Sushi,
        moments, DT, yaml, AnnotationHub, BSgenome, httpuv, mirbase.db
RoxygenNote: 6.0.1
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
git_url: https://git.bioconductor.org/packages/Ularcirc
git_branch: RELEASE_3_8
git_last_commit: 95e51c5
git_last_commit_date: 2018-10-30
Date/Publication: 2018-10-30
NeedsCompilation: no
Packaged: 2018-10-31 04:03:10 UTC; biocbuild
Author: David Humphreys [aut, cre]
Maintainer: David Humphreys <d.humphreys@victorchang.edu.au>
Built: R 3.5.1; ; 2018-10-31 11:57:20 UTC; windows
