parse_vcf_file {Uniquorn} | R Documentation

## Filter Parsed VCF Files

### Description

Intern utility function. Filters the parsed VCF file for all informations except for the start and length of variations/mutations.

### Usage

    parse_vcf_file(
        vcf_file,
        ref_gen,
        library_name
    )

### Arguments

`vcf_file` | character string giving the path to the vcf file on the operating system.
`ref_gen` | Reference genome version
`library_name` | Name of the reference library

### Value

Loci-based DNA-mutational fingerprint of the cancer cell line as found in the input VCF file.

[Package Uniquorn version 2.2.1 Index]