a371b39ea06ca051b5ef933f3c0c6fa4 *DESCRIPTION
01114f6951e6e40ce15508e701370f39 *INDEX
e4a06d059e362ab551eb73db3928c5f3 *Meta/Rd.rds
77a30dbd9a48297ae6e6ef2194a95267 *Meta/features.rds
27a5c4db4f0a6fd31311833616cdad33 *Meta/hsearch.rds
09bfb242f07c05b5b7db6daa4ec0cd89 *Meta/links.rds
7c4bcc78afebe2de2a0b46bf5a52b087 *Meta/nsInfo.rds
9ca46e0327dfc5a9703afb4b6bbb4758 *Meta/package.rds
5d80eeaa4c7ca02861559bdd04650a79 *Meta/vignette.rds
7eb4fbbbede837223c7b6cfcb082b010 *NAMESPACE
5a00eae3b01b3dabd0dfbb9e9fe398e0 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/amplican
7702bf3bf5a0388a8359604be4fa1ec4 *R/amplican.rdb
c71577d46436dfb71489dc747ee79ed4 *R/amplican.rdx
b8ccc81f31c0559fa085bd79613e7357 *TODO
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2bad9351dd5a10b75443f4b8c7863f76 *doc/example_guide_report.R
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3aa1c1455b60a86b80474fcf24aa09e0 *extdata/results/alignments/AlignmentsExperimentSet.rds
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6658a89f707a57d30aa48a43e724a8e0 *extdata/results/alignments/unassigned_reads.csv
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9d9a5b1659d8d6bd7e8f7c899c10698a *help/amplican.rdb
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1e6f00d41a252b1bc86c96c349a8b7e9 *html/alphabetQuality.html
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9e5739b36b5202160921fa8d98260fd8 *html/amplicanPipeline.html
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a025950ae9651f22eadb63737df3f21c *html/checkTarget.html
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3e06dec37c0da46d4e483def2aaab2bd *html/comb_along.html
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9e67bf83c017661e41367ba41c319f74 *html/decode.html
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243d61ebd424b45442c39ff61dbd93f6 *html/findEOP.html
9261c384db71a09065ef31eb53710bc5 *html/findLQR.html
d41eac06ec8151dc2c51984649bc471f *html/findPD.html
825fac78df67e8718633f3ef8e00d991 *html/flipRanges.html
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1f2dc1de13f89d87d2375dde7b2cfa18 *html/fwdReadsType-set.html
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0eabdc5540adf530a40d49fdec1b4ffd *html/getEvents.html
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b65f4cca12dcf66378d01b22f0b7515c *html/get_left_primer.html
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9fccceb57e3c8d4a45f7bcbf55a880ff *html/goodBaseQuality.html
36f2731925cdcc6ef2e520645e978ef2 *html/lookupAlignment.html
0722547bc62df813162cd7af05992366 *html/makeAlignment.html
10ae2ae4463b9cfa31de910010f52678 *html/metaplot_deletions.html
695e1ab46ab0760b1891ed34a2cfcf4f *html/metaplot_insertions.html
37c8c9b4fea8e5de806abf266b6ad5b1 *html/metaplot_mismatches.html
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44fb306810969800300ee66883e3c01f *html/unassignedData.html
71408121e85a9077d393d18c24d0664b *html/upperGroups.html
101a065256e1000ebb10b33baec90c8e *html/writeAlignments.html
9bac5d9abb26bccfb261493f1c087de1 *rmarkdown/templates/amplicon_report/skeleton/skeleton.Rmd
655218255ebe76ff75d364fa460699ff *rmarkdown/templates/amplicon_report/template.yaml
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91dcd8aab8a92b0b874855a7fef5c4d8 *rmarkdown/templates/barcode_report/template.yaml
409df94fd13c00dc9793920833fa2ced *rmarkdown/templates/group_report/skeleton/skeleton.Rmd
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4f2ab0b3739252a8431f9d2ef5d04276 *rmarkdown/templates/guide_report/template.yaml
db60508acff844f2f521b8878c3cb53c *rmarkdown/templates/id_report/skeleton/skeleton.Rmd
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2ea382ef8600e37b0a278c7dc9f8ad3a *rmarkdown/templates/index_report/skeleton/skeleton.Rmd
08df645e81995db2d228de09f69a0cea *rmarkdown/templates/index_report/template.yaml
60b0f0e1f1870a8c9e5ca15743d862ed *test_data/test_aln.csv
08c09237fc07e51e8e66072379825ace *test_data/test_cfg.csv
