geneIDs {ballgown} | R Documentation

## get gene IDs from a ballgown object

### Description

get gene IDs from a ballgown object

### Usage

    geneIDs(x)

    ## S4 method for signature 'ballgown'
    geneIDs(x)

### Arguments

`x` | a ballgown object

### Details

This vector differs from that produced by geneNames in that geneIDs produces names of loci created during the assembly process, not necessarily annotated genes.

### Value

named vector of gene IDs included in the ballgown object. If object was created using Tablemaker, these gene IDs will be of the form "XLOC_*". Vector is named and ordered by corresponding numeric transcript ID.

### See Also

`geneNames`

### Examples

    data(bg)
    geneIDs(bg)

[Package ballgown version 2.14.1 Index]