Node_Diseases_obj {bioCancer} | R Documentation

## Attributes color and shape to Nodes of Diseases

### Description

Attributes color and shape to Nodes of Diseases

### Usage

    Node_Diseases_obj(genesclassdetails)

### Arguments

`genesclassdetails` | a dataframe from geNetClassifier function

### Value

A data frame with nodes Shapes and colors

### Examples

    GenesClassDetails <- structure(list(Genes = c("FANCF", "MLH1", "MSH2", "ATR", "PARP1",
    "CHEK2", "RAD51"), ranking = c(1L, 1L, 1L, 2L, 3L, 1L, 2L), class = c("brca_tcga",
    "gbm_tcga", "lihc_tcga", "lihc_tcga", "lihc_tcga", "lusc_tcga",
    "lusc_tcga"), postProb = c(1, 0.99, 1, 0.99, 0.99, 1,
    0.98), exprsMeanDiff = c(180, 256, -373, -268,
    -1482, 258, 143), exprsUpDw = c("UP", "UP", "DOWN",
    "DOWN", "DOWN", "UP", "UP")), .Names = c("Genes", "ranking",
    "class", "postProb", "exprsMeanDiff", "exprsUpDw"),
    class = "data.frame", row.names = c(NA,-7L))
    Node_Diseases_df <- Node_Diseases_obj(genesclassdetails= GenesClassDetails)

[Package bioCancer version 1.10.11 Index]