# Generated by roxygen2: do not edit by hand

export(compareAgainstL1000)
export(downloadENCODEknockdownMetadata)
export(downloadENCODEsamples)
export(downloadL1000data)
export(filterL1000metadata)
export(getL1000conditions)
export(getL1000perturbationTypes)
export(loadL1000perturbations)
export(performDifferentialExpression)
export(plotL1000comparison)
export(prepareENCODEgeneExpression)
importFrom(R.utils,gunzip)
importFrom(cowplot,plot_grid)
importFrom(data.table,data.table)
importFrom(data.table,fread)
importFrom(data.table,setkeyv)
importFrom(fgsea,calcGseaStat)
importFrom(fgsea,fgsea)
importFrom(ggplot2,aes)
importFrom(ggplot2,element_blank)
importFrom(ggplot2,element_line)
importFrom(ggplot2,element_rect)
importFrom(ggplot2,element_text)
importFrom(ggplot2,geom_bar)
importFrom(ggplot2,geom_hline)
importFrom(ggplot2,geom_line)
importFrom(ggplot2,geom_point)
importFrom(ggplot2,geom_segment)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,ggtitle)
importFrom(ggplot2,guides)
importFrom(ggplot2,labs)
importFrom(ggplot2,scale_colour_gradient2)
importFrom(ggplot2,scale_x_continuous)
importFrom(ggplot2,scale_y_continuous)
importFrom(ggplot2,theme)
importFrom(ggplot2,theme_bw)
importFrom(ggplot2,unit)
importFrom(graphics,plot)
importFrom(httr,GET)
importFrom(httr,content)
importFrom(limma,eBayes)
importFrom(limma,lmFit)
importFrom(limma,topTable)
importFrom(limma,voom)
importFrom(methods,new)
importFrom(pbapply,pblapply)
importFrom(piano,loadGSC)
importFrom(plyr,rbind.fill)
importFrom(readr,read_tsv)
importFrom(rhdf5,h5read)
importFrom(stats,aggregate)
importFrom(stats,cor.test)
importFrom(stats,model.matrix)
importFrom(stats,na.omit)
importFrom(stats,p.adjust)
importFrom(utils,download.file)
importFrom(utils,head)
importFrom(utils,packageVersion)
importFrom(utils,tail)
