intensityFiles {cellHTS2} | R Documentation

## Retrieve the contents of the input files used to generate a given cellHTS object.

### Description

These generic functions access different slots of an object derived from the `cellHTS` class, which contain the original content of the input files used to create the object.

### Usage

    intensityFiles(object)
    plateList(object)
    plateConf(object)
    screenLog(object)
    screenDesc(object)

### Arguments

`object` | an object of class `cellHTS`.

### Value

`intensityFiles` returns a list, where each component contains a copy of the imported input data files.

`plateList` returns a data.frame containing what was read from the plate list file, plus a column `status` of type character that contains the string "OK" if the data import appeared to have gone well, and the respective error or warning message otherwise. See `readPlateList` for more details.

`plateConf` returns a data.frame that contains what was read from the plate configuration input file (except the first two header rows) during the screen configuration step. For more details see `configure`.

`screenLog` returns a data.frame containing what was read from the screen log input file during the screen configuration step. See `configure` for more details.

`screenDesc` returns an object of class `character` that contains what was read from the screen description input file during the configuration of the `cellHTS` object. See `configure` for more details.

### Author(s)

Ligia Bras ligia@ebi.ac.uk

### See Also

`cellHTS`, `readPlateList`, `configure`, `name`

[Package cellHTS2 version 2.46.1 Index]