multivariateSegmentation {chromstaR} | R Documentation

## Multivariate segmentation

### Description

Make segmentation from bins for a `multiHMM` object.

### Usage

    multivariateSegmentation(bins, column2collapseBy = "state")

### Arguments

`bins` | A `GRanges-class` with binned read counts.
`column2collapseBy` | The number of the column which will be used to collapse all other inputs. If a set of consecutive bins has the same value in this column, they will be aggregated into one bin with adjusted genomic coordinates.

### Value

A `GRanges-class` with segmented regions.

[Package chromstaR version 1.8.1 Index]