pseudocount {cobindR} | R Documentation

## pseudocount of cobindR configuration object

### Description

pseudocount of cobindR configuration object. Set to 10 as default

### Usage

    ## S4 method for signature 'configuration'
    pseudocount(x)
    ## S4 replacement method for signature 'configuration,character'
    pseudocount(x) <- value

### Arguments

`x` | a cobindR configuration object
`value` | pseudocount for detrending analysis, i.e. the default number in each distance bin.

### Value

pseudocount (numeric)

### Author(s)

Rob Lehmann <r.lehmann@biologie.hu-berlin.de>

### See Also

`id`,`experiment_description`,`sequence_source`,`sequence_origin`,`sequence_type`,`bg_sequence_source`,`bg_sequence_origin`,`bg_sequence_type`,`species`,`downstream`,`upstream`,`max_distance`,`pairs`,`pfm_path`,`threshold`,`fdrThreshold`,`path`,`mart`,`pseudocount`,`pValue`

### Examples

    cfg <- cobindRConfiguration()
    pseudocount(cfg)

[Package cobindR version 1.20.0 Index]