snprmaAffy {crlmm} | R Documentation

## Quantile normalize intensities for SNPs

### Description

Quantile normalize intensities for SNPs to a HapMap target reference distribution

### Usage

    snprmaAffy(cnSet, mixtureSampleSize = 10^5, eps = 0.1, seed = 1, verbose = TRUE)

### Arguments

`cnSet` | Object of class `CNSet`
`mixtureSampleSize` | Sample size to be use when fitting the mixture model.
`eps` | Stop criteria.
`seed` | Seed to be used when sampling.
`verbose` | Logical.

### Value

Returns nothing. Normalized intensities are written to files.

### Author(s)

R.Scharpf

### See Also

`snprma`

[Package crlmm version 1.40.0 Index]