testDAUresults-class {dagLogo} | R Documentation

## Class `"testDAUresults"`

### Description

An object of class `"testDAUresults"` represents background model.

### Objects from the Class

Objects can be created by calls of the form `new("dagBackground", group="character", difference="matrix", zscore="matrix", pvalue="matrix", background="matrix", motif="matrix", upstream="numeric", downstream="numeric")`.

### Slots

`group`

  Object of class `"character"` could be "null", "classic", "charge", "chemistry", "hydrophobicity"

`difference`

  code"matrix" the difference of inputs from background for each amino acid in each position

`zscore`

  code"matrix" z score for each amino acid in each position

`pvalue`

  code"matrix" pvalue for each amino acid in each position

`background`

  code"matrix" background frequencies for each amino acid in each position

`motif`

  code"matrix" inputs frequencies for each amino acid in each position

`upstream`

  `"numeric"` The upstream offset from anchor

`downstream`

  `"numeric"` The downstream offset from anchor

[Package dagLogo version 1.20.0 Index]