counts {deepSNV} | R Documentation

## Example count table

### Description

A table with counts of the HIVmix data set. Used for minimal unit testing.

### Examples

    data("counts", package="deepSNV")
    countsFromBam <- bam2R(file = system.file("extdata", "test.bam", package="deepSNV"), chr="B.FR.83.HXB2_LAI_IIIB_BRU_K034", start = 3120, stop=3140, q = 10)
    all(counts == countsFromBam)

[Package deepSNV version 1.28.0 Index]