control {deepSNV} | R Documentation

## Get control counts

### Description

Convenience function to obtain the control counts from a deepSNV object.

### Usage

    control(deepSNV, ...)

    ## S4 method for signature 'deepSNV'
    control(deepSNV, total = FALSE)

### Arguments

`deepSNV` | a `deepSNV-class` object
`...` | Additional param passed to specific methods
`total` | Logical. If true the sum of both strands is returned

### Value

A matrix with the absolute frequencies summed over both strands.

### Examples

    data(HIVmix)
    control(HIVmix)[1:10,]
    control(HIVmix, total=TRUE)[1:10,]

[Package deepSNV version 1.28.0 Index]