plot {dexus} | R Documentation

## Visualization of a result of the DEXUS algorithm.

### Description

Plots a heatmap of the log read counts of the top ranked genes or of selected genes.

### Arguments

`x` | An instance of "CNVDetectionResult"
`idx` | The indices or the transcript names of the transcripts that should be visualized as heatmap.
`cexSamples` | Size of the column labels, i.e. the samples.
`cexGenes` | Size of the row labels, i.e. the transcripts.
`newColNames` | renames the samples.
`type` | Mark the samples, that do not belong to the major class by crosses ("crosses"), or boxes ("boxes").

### Value

Generates a heatmap of the expression values of the top-ranked transcripts.

### Author(s)

Guenter Klambauer klambauer@bioinf.jku.at and Thomas Unterthiner unterthiner@bioinf.jku.at

### Examples

    data(dexus)
    r <- dexus(countsBottomly[1:100, ])
    plot(r)

[Package dexus version 1.22.1 Index]