readSpfabiaResult {fabia} | R Documentation

## Factor Analysis for Bicluster Acquisition: Read Results of SpFabia

### Description

`readSpfabiaResult`: C implementation of `readSpfabiaResult`.

### Usage

    readSpfabiaResult(X)

### Arguments

`X` | the file prefix name of the result files of spfabia.

### Details

Read the results of spfabia.

The code is implemented in C.

### Value

`` | object of the class `Factorization`. Containing `L` (loadings L), `Z` (factors Z), `Psi` (noise variance σ), `lapla` (variational parameter), `avini` (the information which the factor z_{ij} contains about x_j averaged over j) `xavini` (the information which the factor z_{j} contains about x_j) `ini` (for each j the information which the factor z_{ij} contains about x_j).

### Author(s)

Sepp Hochreiter

### References

S. Hochreiter et al., ‘FABIA: Factor Analysis for Bicluster Acquisition’, Bioinformatics 26(12):1520-1527, 2010. http://bioinformatics.oxfordjournals.org/cgi/content/abstract/btq227

### See Also

`fabia`, `fabias`, `fabiap`, `spfabia`, `readSamplesSpfabia`, `readSpfabiaResult`, `fabi`, `fabiasp`, `mfsc`, `nmfdiv`, `nmfeu`, `nmfsc`, `extractPlot`, `extractBic`, `plotBicluster`, `Factorization`, `projFuncPos`, `projFunc`, `estimateMode`, `makeFabiaData`, `makeFabiaDataBlocks`, `makeFabiaDataPos`, `makeFabiaDataBlocksPos`, `matrixImagePlot`, `fabiaDemo`, `fabiaVersion`

[Package fabia version 2.28.0 Index]