exp_data {hipathia} | R Documentation

## Normalized BRCA gene expression dataset

### Description

Experimental design matrix once expression matrix `brca_data` has been translated to Entrez geens with `translate_matrix` and normalized using `normalize_data`.

### Usage

    data(exp_data)

### Format

Matrix with 40 columns and 3184 rows. Row names are Entrez IDs and column names are the TCGA identifyers of the samples.

### Details

To create the data, the following functions have been called: `trans_data <- translate_matrix(brca_data, "hsa")` `exp_data <- normalize_data(trans_data)`

### Value

Matrix with 40 columns and 3184 rows. Row names are Entrez IDs and column names are the TCGA identifyers of the samples.

[Package hipathia version 1.4.1 Index]