plot_corr {iCOBRA} | R Documentation

## Plot correlations

### Description

Plot correlations between observations and a continuous truth value.

### Usage

    plot_corr(cobraplot, title = "", stripsize = 15, titlecol = "black",
      pointsize = 5, xaxisrange = c(-1, 1), corrtype = "pearson")

### Arguments

`cobraplot` | A `COBRAPlot` object.
`title` | A character string giving the title of the plot.
`stripsize` | A numeric value giving the size of the strip text, when the results are stratified by an annotation.
`titlecol` | A character string giving the color of the title.
`pointsize` | A numeric value giving the size of the plot characters.
`xaxisrange` | A numeric vector with two elements, giving the lower and upper boundary of the x-axis, respectively.
`corrtype` | A character string giving the type of correlation to show. Either "pearson" or "spearman".

### Value

A ggplot object

### Author(s)

Charlotte Soneson

### Examples

    data(cobradata_example)
    cobraperf <- calculate_performance(cobradata_example, cont_truth = "logFC",
                                       aspects = "corr")
    cobraplot <- prepare_data_for_plot(cobraperf, colorscheme = "Dark2",
                                       incltruth = TRUE)
    plot_corr(cobraplot, corrtype = "spearman")

[Package iCOBRA version 1.10.0 Index]