metaSeq-package {metaSeq} | R Documentation

## Meta-analysis of RNA-Seq count data in multiple studies

### Description

Meta-analysis for multiple studies's RNA-Seq count data. In this package, probability of gene differential is calculated by NOISeq, which is customized for one-sided test. One-sided probabilities are integrated by Fisher's method (without weighting) or Stouffer's method (with weighting by sample-size). P-values or probabilities calculated by non-NOISeq methods are also applicable by `other.oneside.pvalues`.

### Details

Package: | metaSeq
Type: | Package
Version: | 1.3.2
Date: | 2013-12-2
License: | Artistic-2.0

### Author(s)

Koki Tsuyuzaki, Itoshi Nikaido

Maintainer: Koki Tsuyuzaki <k.t.the-answer@hotmail.co.jp>

### References

Tarazona, S. and Garcia-Alcalde, F. and Dopazo, J. and Ferrer, A. and Conesa, A. (2011) Differential expression in RNA-seq: A matter of depth. Genome Research, 21(12): 2213-2223

### See Also

`readData`, `noiseq`

[Package metaSeq version 1.22.1 Index]