GElist-class {methylPipe} | R Documentation

## Class "GElist"

### Description

This class is used in the methylPipe library to collect a set of GEcollection objects

### Objects from the Class

Objects can be created by calls of the form `new("GElist", ...)` or using the function GElist(Objlist,names), see below. GElist are a collection of GEcollection objects (see `GElist-class`).

### Slots

`Objlist`:

  Object of class `"list"` : a list where each item is a GEcollection object

`names`:

  Object of class `"character"` : vector of the names of the objects

### Methods

"[["

  `signature(x = "GElist")`: subsets the GElist returning a specific GEcollection object

"[[<-"

  `signature(x = "GElist")`: replaces the specific GEcollection object in the GElist

"["

  `signature(x = "GElist")`: subsets the GElist returning another GElist

### Author(s)

Mattia Pelizzola

### See Also

`GElist-class`

### Examples

    gecollect_file <- system.file('extdata', 'gec.H1.Rdata', package='methylPipe')
    load(gecollect_file)
    gec1 <- gec.H1[start(gec.H1) < 153924]
    gec2 <- gec.H1[start(gec.H1) > 153924]
    gel.set <- GElist(g1=gec1, g2=gec2)

[Package methylPipe version 1.16.0 Index]