dcf427f22f04128570f1d58476f311b4 *CITATION
84685aea62105aa74f8366809ba16bb3 *DESCRIPTION
5544753131d9ee908f786a1b456e0526 *INDEX
74908689bed625336996a27f3835187d *Meta/Rd.rds
429724b30f0322e2d56778dd130867d3 *Meta/features.rds
60d992d9a978dd3e00c6d29c982b0800 *Meta/hsearch.rds
945b2db7d9bab99d2fa78502376a500c *Meta/links.rds
79f7425c1e33891eb83d3a63ac7994ee *Meta/nsInfo.rds
bfab57b95a3ea179a5d9c27ecdfe9c5e *Meta/package.rds
4628d11f2e73d50e71314105f09c21e7 *Meta/vignette.rds
8b13203d21b38f8e40b82a56146221c3 *NAMESPACE
d6424224e3e1862c55673b0861c40aef *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/motifcounter
66fa3ec6c3753703c80215826ec82d6b *R/motifcounter.rdb
8307cf9df1677a17d86357b58dd4b0ed *R/motifcounter.rdx
8d19a5d7e38a6ebf1d7ef41ae23963a5 *doc/index.html
c26c605c38ac1bc344fb224bba12ad6d *doc/motifcounter.R
4522999932c71a38ebe74b53da6cb32a *doc/motifcounter.Rmd
68818f934af2ddf4085e866dfe06962b *doc/motifcounter.html
50df954ee79d0f5a78eb73d8bc322d4c *extdata/m1.tab
6441842ee60b856a7dbd3e8269175572 *extdata/m12.tab
ab7fc1464e844415056df107769f4b64 *extdata/m2.tab
072c2db184ea9dd62de9a67c747edc44 *extdata/oct4_chipseq.fa
5b38fa6389b08d3a65f21294be7aee07 *extdata/seq.fasta
f142bb690529139fed13c75e0ecbaac4 *extdata/seq1.fasta
9cc226e7e9a2a7797dff257bc31ac5a1 *extdata/seq2.fasta
3b458d2042a7ab6a93442abe29c9edbc *extdata/test.fa
d309d44d1afb8021344ff0e4aeca342a *extdata/test.tab
41a01add41f4e45303e61b6366f07eb9 *extdata/test2.fa
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0f7fd6131c16f42826fba4895e26b53f *extdata/x21.tab
0cf2f5d8c38b3d48158a42af0589b46c *extdata/x3.tab
85418671c5dc1dc29156d8bed9f1dc85 *extdata/x31.tab
0d596bc3216241c2ef0ac9f67d859305 *extdata/x32.tab
a63c9d9bde5e7d71d5e533284ae38d28 *extdata/x8.tab
3be84dbaba38c8f4b0b0ff4c395e430d *help/AnIndex
56259bb65eec0f864e060eaec43fc644 *help/aliases.rds
bcef36fe16365eee941ea20c04b115de *help/motifcounter.rdb
19eec593d4e58a7ddfd3edbdfde71e85 *help/motifcounter.rdx
fa26dbe7be4390a305176c1d7960663a *help/paths.rds
139d7fb94810340a9247d32fa006ac0d *html/00Index.html
f89bf1262b7596c666b4393e89c72365 *html/Background-class.html
fe3795afc5ae77e047214755cdfcd93e *html/Overlap-class.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
986d662bc81e4e0b11f5b6bc0558ae46 *html/clumpSizeDist.html
b6a50c9f3968748f454dfd8b07840b9e *html/combinatorialDist.html
3f2de2b1bd48b64d78f4853fd8600c64 *html/compoundPoissonDist.html
5647c2ab063736ba8bb0614334687130 *html/computeClumpStartProb.html
17c8899642d7c05c3b5d91e01c6d1b2e *html/generateDNAString.html
21230170698cdd137f82b220856fec46 *html/generateDNAStringSet.html
24300d617135795c2f038daeb77ef531 *html/getAlpha.html
3905f411dcf21bb8a1358307f4f781b0 *html/getBeta.html
6249bb61c94db7dcaa2a904b25d1f2dd *html/getBeta3p.html
69ba9f0d609eded7925d6566ec296e70 *html/getBeta5p.html
61b53af5baa6ef8bcbfc971d9aa34de3 *html/getCounts.html
4276da4f5ae0102bc0b83c20208aac0e *html/getGamma.html
278ed2e0f1d88553a03f10fdf217ac3e *html/getOrder.html
978e5c2957111d815d7b44e3a62a8f4d *html/getSinglestranded.html
3c0e51e77a1d0554e81a05ac64d0124f *html/getStation.html
034b13cd0d85dded3cbc381f5829d74e *html/getTrans.html
31bf9ec24a5f5b7714caa3d0f6c2b0aa *html/hitStrand.html
80971372099d04f67c4175fd8f3c0e5f *html/lenSequences.html
86028602c1fde532f62c2c850da8fec9 *html/markovModel.html
9f66e4ae1420ae47f92f2f0f5c4fab36 *html/motifAndBackgroundValid.html
0d0e52a0396eb89ee9a40a687345ac5e *html/motifEnrichment.html
c9b9b71a07166f33793ab6b2530dc44b *html/motifHitProfile.html
29c342f7a4cb87a1b594f3fd38f2a723 *html/motifHits.html
f69a20c9e476ad7f94c1cf682cffab3b *html/motifValid.html
6150694656984ea9edab9e8d9c091761 *html/motifcounter-package.html
f5a817ea7cc01824fb05a4be5f509a29 *html/motifcounterOptions.html
729ef2ab7075d36c2ec63defcb859818 *html/normalizeMotif.html
4633a9fa8745733537eee188dfeb4405 *html/numMotifHits.html
4dfc02cf2502b19ba328b697a0c17475 *html/probOverlapHit.html
a745e365f0997098634d92e5047b9232 *html/readBackground.html
e31b93638e708c29f83dfeca19d0cd45 *html/revcompMotif.html
d93c6ce04a977d91e02f881712c2702c *html/scoreDist.html
b9f807178072426eedb590e7993031b7 *html/scoreDistBf.html
3d14504746486c783ee8801c2cf20917 *html/scoreDistEmpirical.html
8a003af8427550a3527958668edae4ed *html/scoreHistogram.html
b6830afb5e301196d8aa4b0dff9bfbe1 *html/scoreHistogramSingleSeq.html
250163522341b080014202b665a961a2 *html/scoreProfile.html
00e1f6db927dd02f1a66edb16e1c90a9 *html/scoreSequence.html
4d7e82eacb2cd2ec0a3dd8009825666b *html/scoreStrand.html
be4803639806807ca9036f05e0f1868f *html/scoreThreshold.html
aeee3a4843f8ce5f3fcf204d44303453 *html/sigLevel.html
6ac0fac49206ef4124dd1fc75eb83eea *html/simulateClumpSizeDist.html
9794ad89309d492758790c9cf107931a *html/simulateNumHitsDist.html
a157872e693939b94dc9c7e47da3aa1d *libs/i386/motifcounter.dll
85d32fbb2bad472b684aa3fcf90183dc *libs/x64/motifcounter.dll
