readBowtie {nucleR} | R Documentation

## Import reads from a vector of Bowtie files

### Description

This function allows to load reads from Bowtie files from both single and paired-end commming from Next Generation Sequencing nucleosome mapping experiments.

### Usage

    readBowtie(files, type = "paired")

### Arguments

`files` | List of input Bowtie files.
`type` | Describes the type of reads. Values allowed are `single` for single-ended reads and `paired` for pair-ended.

### Value

GenomicRanges::GRangesList containing the reads of each input BAM file.

### Author(s)

Ricard Illa ricard.illa@irbbarcelona.org

[Package nucleR version 2.14.0 Index]