getNodes,gatingTemplate-method {openCyto} | R Documentation

## get nodes from gatingTemplate object

### Description

get nodes from gatingTemplate object

### Usage

    ## S4 method for signature 'gatingTemplate'
    getNodes(x, y, order = c("default", "bfs", "dfs",
      "tsort"), only.names = FALSE)

### Arguments

`x` | `gatingTemplate`
`y` | `character` node index. When `missing`, return all the nodes
`order` | `character` specifying the order of nodes. options are "default", "bfs", "dfs", "tsort"
`only.names` | `logical` specifiying whether user wants to get the entire `gtPopulation` object or just the name of the population node

### Examples

    ## Not run:
    gt <- gatingTemplate(system.file("extdata/gating_template/tcell.csv",package = "openCyto"))
    getNodes(gt)[1:2]
    getNodes(gt, only.names = TRUE)
    getNodes(gt, "/nonDebris")

    ## End(Not run)

[Package openCyto version 1.20.2 Index]