importPandaMatlab {pandaR} | R Documentation

## Panda Matlab importer

### Description

Imports the files from the `exportPanda.m` file.

### Usage

    importPandaMatlab(dir = getwd(), celldata = "celldata.dat")

### Arguments

`dir` | Working directory to search for the numeric files.
`celldata` | Name of the 'celldata.dat' file.

### Value

Two column vector of "regulator" and "target"

### Examples

    # determine gene degree
     pandaFiles = importPandaMatlab()
     indegree <- ddply(pandaFiles[,2:ncol(pandaFiles)], .(targer), numcolwise(sum))
     row.names(indegree) <- indegree[,1]
     indegree <- indegree[,-1]
     # to export the file
     networkfiles = list.files(pattern="numeric")
     write.table(indegree,paste("indegree_",networkfiles,sep=""),
                 sep="\t",quote=F,row.names=T,col.names=T)

[Package pandaR version 1.14.0 Index]