pandaToyData {pandaR} | R Documentation

## Toy gene expression, motif, and ppi data

### Description

This data is a list containing three data.frames. The motif data.frame describes a set of pairwise connections where a specific known sequence motif of a transcription factor was found upstream of the corresponding gene. The expression data.frame is a set of 1000 gene expression levels measured across 50 samples. Finally, the ppi data.frame describes a set of known pairwise protein interactions.

### Usage

    pandaToyData

### Format

A list containing 3 data.frames

### Value

A list of length 3

### References

Glass K, Huttenhower C, Quackenbush J, Yuan GC. Passing Messages Between Biological Networks to Refine Predicted Interactions. PLoS One. 2013 May 31;8(5):e64832.

[Package pandaR version 1.14.0 Index]