94721ea2c18c37fcb75e372c813ff676 *DESCRIPTION
b57f1f87aaa983fa238ab1a4c1216bf7 *INDEX
c5dc18aa9d7e9d3bc8f3d6b7f9c7c492 *Meta/Rd.rds
16ae041980f5b60b1fa326a488c7010b *Meta/data.rds
429724b30f0322e2d56778dd130867d3 *Meta/features.rds
b698129a02cdba8af984502aa0d2a86b *Meta/hsearch.rds
a93d13adc93e8bef3ee52c4213eef098 *Meta/links.rds
7a4ac7545a9f6c6e611b33e8eaadc8cd *Meta/nsInfo.rds
6abe1593d7943b38b3545eb1262bf125 *Meta/package.rds
b2aafabe6ced42d94d2a426eff296bcf *NAMESPACE
594c0d4f02b79551b089be17d3c83296 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/pwOmics
5feab38dfa82bec299ba81e568d8cc68 *R/pwOmics.rdb
8148a874e795d72d6190931675cd0c6e *R/pwOmics.rdx
62f1951990e4a48b8e9576a63de2a20d *data/OmicsExampleData.RData
0173a6340a384e4863487ec72a92f25c *extdata/Genelists/Genelist_biocarta.RData
8ce73f94923b113e1b37341189cc1fa5 *extdata/Genelists/Genelist_kegg.RData
3966ca5db8518cdf31378969a73c53e7 *extdata/Genelists/Genelist_nci.RData
9f57a879f9965936a1ae43478a963a13 *extdata/Genelists/Genelist_reactome.RData
8212a0c9e1ddcbd8edbc9037b606eca5 *extdata/TF_targets.txt
98b206046ac2e5a7723f5b450b628003 *extdata/chea-background.csv
e179e6d1de61e0f377aef5c587e79401 *extdata/mat_phospho.csv
cbff0dfb526df4226b5903b7443c06f6 *extdata/phospho_anno.txt
1bfd415c150f248004e280346bdcd2fc *extdata/phospho_reg_table.txt
52bfb1275c60a7e2e3b2bbbb1bb348fd *extdata/transcriptome_signif.txt
c0a168a7153f25de41757b7fd6b64472 *help/AnIndex
37d261b80ee2700b550a16f9ea06fa62 *help/aliases.rds
0aef5c2fcd5e95ab27d26af8a83c23f8 *help/paths.rds
5cd0e3a1488537d52ce51143e4f5eeac *help/pwOmics.rdb
85c0b655407240757c5f58fdc20bf792 *help/pwOmics.rdx
530f14fd980420320e7fc4fb9573039d *html/00Index.html
d6c4dd94d4a3fc9aa010e87651fedaa2 *html/OmicsExampleData.html
dd8a923cc2a407463b6e18c8e2e5a102 *html/PWidentallprots.html
635d5e90a8054b0ce5c03848755790c3 *html/PWidentallprotssub.html
d95ff67c06234bbdf27bca9fdbe3b71d *html/PWidenttps.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
51be6aeda688b7342324339fa0d350c6 *html/SteinerTree_cons.html
22925945fea384af162de249323e21a5 *html/TFidentallgenes.html
9417390e1d81d92636420026bbda9a01 *html/TFidenttps.html
5f5985dfcf4f38e406bbd52f27510467 *html/addFeedbackLoops.html
332d0ffdad3f4215d30781af9ba84c93 *html/clusterTimeProfiles.html
3666d91b3c6dbab37b52626d0d1cf000 *html/consDynamicNet.html
65fc213bcc5349b77d81d564d0942c67 *html/createBiopaxnew.html
735813e697991e5ae35e5cd6b74aa69b *html/createIntIDs.html
4a6c6f7dc6a2d06be71717cf8448b999 *html/findSignalingAxes.html
51a9c6307fe8660c4940a08629c10564 *html/findxneighborsoverlap.html
d5c9d128f76297a7ebd1d05f2b7fd27b *html/findxnextneighbors.html
f734c4cd870e8b22733347a84656af0e *html/genGenelists.html
a19039cc0d4f7d5378ec393feed27a1f *html/genGenelistssub.html
59eaa40a272d39b9a83947117c8a47b9 *html/genIntIDs.html
af288ce61804306f2b88893fa04d3047 *html/generate_DSSignalingBase.html
a8ae507087752ebca65827362b788f07 *html/genfullConsensusGraph.html
f9fbc6cd40cb8a0adc1dff9a6b5f970e *html/getAlias_Ensemble.html
06e363eb8b904bbfcf11f3fcc1956113 *html/getAliasfromSTRINGIDs.html
ce4b07b5031baa368111fd2304c9aa96 *html/getBiopaxModel.html
1ef12951606871931f1ba35da2af2450 *html/getConsensusSTRINGIDs.html
0cc0a95a957b35a0d855a14f56785404 *html/getDS_PWs.html
e057c03acaa6585bbb44e2ade8b63f63 *html/getDS_TFs.html
61615c6ff9c3e7e9126339ca92c4e893 *html/getDS_TGs.html
124c84dd18e60f466489c11c9cb35830 *html/getFCsplines.html
05d8ad2543c2b595fcf6fcfb00a300b0 *html/getGenesIntersection.html
16b7a8b47a7d6a4d420ed7b136b10740 *html/getOmicsDataset.html
774343709955919729a4dcc869e7c964 *html/getOmicsTimepoints.html
b011dbdc38772578eb6a36734e0f3cec *html/getOmicsallGeneIDs.html
6745589cc7eb0a48012fb08ef66fa55c *html/getOmicsallProteinIDs.html
72fe618d62a6d0e0384aab6028d69553 *html/getProteinIntersection.html
83c71b4b08a9d231b7ab07aafc2afcb8 *html/getSTRING_graph.html
13a07fe52f840daf63e74f3e34965418 *html/getTFIntersection.html
7d253bb0d59907e48f75ca9c72d07111 *html/getUS_PWs.html
9d520de5883a6240b7b8437c3cc2451c *html/getUS_TFs.html
1e0b8594e84ece517439f52a51911a56 *html/getUS_regulators.html
3445e7e97de303f6c31b2ae2b3fdc4e1 *html/get_matching_transcripts.html
268a9823db1bf2e3fad717759935ba15 *html/getbipartitegraphInfo.html
234e30ba0b4e0a896e1ce676fdaed2fe *html/gettpIntersection.html
ffa9cf6394f4993ed5fa060bd0ea85fa *html/identPWsofTFs.html
939d64dcc63ad1c84ada92ed8c132478 *html/identRegulators.html
c6d2044f4592557552fa51af9874d460 *html/identTFTGsinPWs.html
2a28ee28023deb745047b889a1023037 *html/identTFs.html
0a296f55a06a95161faccb4363e333f2 *html/identifyPR.html
f29dc3bb2d45021f834ca2d927b8c575 *html/identifyPWTFTGs.html
8bc72a79548cc37ace6acdd471580281 *html/identifyPWs.html
6957978f2a4bcf67a3c5e58c6e895843 *html/identifyRsofTFs.html
7eb06eade789abf0621666da9fbadbdb *html/identifyTFs.html
d33cc180b06003aae1bdc1e41864077d *html/infoConsensusGraph.html
5fe349caf73241baed6c254588dd5985 *html/loadGenelists.html
b31a97b9738c7864bee8b775b67711c6 *html/loadPWs.html
dd3d6e4bfc55506cb5baecdb91964374 *html/plotConsDynNet.html
14504aebd20ba75db0646609bf305623 *html/plotConsensusGraph.html
62996322348fa59e1e304056484cc1f2 *html/plotConsensusProfiles.html
d7f6615c35804702b09a61465b2161c5 *html/plotTimeProfileClusters.html
db97a6a6487c02527b2d2b770f232dc2 *html/predictFCvals.html
c0e180d4030117ec6a6ecec2fe1110da *html/preparePWinfo.html
392d1ef5200c016c4da99e188bbeb450 *html/print.OmicsData.html
2c7fce7d92c31b6fae4ccd27addf500c *html/pwIntOmics-package.html
20c6fb11407314e0a3930203ce2decd9 *html/readOmics.html
66aecbc824e311a8403680041fae86ff *html/readPWdata.html
4343af32bf9617bb3cce9b2148472aba *html/readPhosphodata.html
fa467d93cfa06dafe564da54387a051b *html/readTFdata.html
6ef31ed9919ed224ec24d6371c291657 *html/readTFtargets.html
1954a74c346e03f9a32a0c4ad1d3025a *html/selectPWsofTFs.html
510d11a2519326259172c813f0c4e9d1 *html/staticConsensusNet.html
b2c02a65dfef7acc4d532b549e1c8c32 *html/temp_correlations.html
122cc06fcca219f21a1377b9d567c51e *unitTests/provided_TF_genes.txt
ecdaa851b286ef5c57d39631fabf5bcb *unitTests/pwIntOmics_exported.R
fe0a87544ccf51eb8843918e086046c7 *unitTests/pwIntOmics_internal.R
