export3Cseq2bedGraph {r3Cseq} | R Documentation

## export interaction regions to the 'bedGraph' format

### Description

export interaction regions from RagedData to the bedGraph format, which suitable for uploading to the UCSC genome browser

### Usage

    export3Cseq2bedGraph(object,datatype=c("rpm","read_count"))

### Arguments

`object` | r3Cseq object, The object might contain the interaction regions generated by function getInteractions
`datatype` | read_count : read count per restriction fragment rpm : normalized read per million per restriction fragment

### Value

The text file in 'bedGraph' format

### Author(s)

S. Thongjuea

### See Also

exportInteractions2text

### Examples

    #See the vignette

[Package r3Cseq version 1.28.0 Index]