getChromosomalPositions {readat} | R Documentation

## Get Chromosomal Positions by AptamerId

### Description

Gets the chromosomal positions associated with SomaLogic aptamer IDs.

### Usage

    getChromosomalPositions(aptamerIds = NULL, simplify = FALSE)

### Arguments

`aptamerIds` | A character vector of SomaLogic aptamer IDs, or `NULL` to use all aptamer IDs.
`simplify` | Logical. Should the output be collapsed into a single data.frame?

### Value

A list of data frames. The names of the list are the input SeqIds, and the data frame associated with that element contains:

UniProtId

  Character. UniProt ID for the protein target.

Chromsome

  Character. Either '1' to '22' or 'X' . (Currently no 'Y' values.)

StartPosition

  Integer. Distance in base pairs from the 5' end of the gene to the start of the protein.

EndPosition

  Integer. Distance in base pairs from the 5' end of the gene to the end of the protein.

### Examples

    # Each AptamerId may have one, many, or zero associated chromosomal positions
    getChromosomalPositions(c("2278-61", "4703-87_2", "4916-2"))

    # Get everything in the 1310 and 1129 panels.
    ## Not run:
    getChromosomalPositions()

    ## End(Not run)

[Package readat version 1.8.0 Index]