enrichRSCE {singleCellTK} | R Documentation

## enrichR Given a list of genes this function runs the enrichR() to perform Gene enrichment

### Description

enrichR Given a list of genes this function runs the enrichR() to perform Gene enrichment

### Usage

    enrichRSCE(inSCE, glist, db = NULL)

### Arguments

`inSCE` | Input SCtkExperiment object. Required
`glist` | selected genes for enrichment analysis using enrichR(). Required
`db` | selected database name from the enrichR database list. if NULL then enrichR will be run on all the available databases on the enrichR database.

### Value

enrichRSCE(): returns a data.frame of enrichment terms overlapping in the respective databases along with p-values, z-scores etc.,

### Examples

    enrichRSCE(mouseBrainSubsetSCE, "Cmtm5", "GO_Cellular_Component_2017")

[Package singleCellTK version 1.2.3 Index]