summariseDiff {splatter} | R Documentation

## Summarise diffSCESs

### Description

Summarise the results of `diffSCEs`. Calculates the Median Absolute Deviation (MAD), Mean Absolute Error (MAE) and Root Mean Squared Error (RMSE) for the various properties and ranks them.

### Usage

    summariseDiff(diff)

### Arguments

`diff` | Output from `diffSCEs`

### Value

data.frame with MADs, MAEs, RMSEs, scaled statistics and ranks

### Examples

    sim1 <- splatSimulate(nGenes = 1000, batchCells = 20)
    sim2 <- simpleSimulate(nGenes = 1000, nCells = 20)
    difference <- diffSCEs(list(Splat = sim1, Simple = sim2), ref = "Simple")
    summary <- summariseDiff(difference)
    head(summary)

[Package splatter version 1.6.1 Index]