jplace-class {treeio} | R Documentation

## Class "jplace" This class stores phylogenetic placements

### Description

Class "jplace" This class stores phylogenetic placements

### Slots

`phylo`

  phylo object for tree structure

`treetext`

  newick tree string

`data`

  associated data

`extraInfo`

  extra information, reserve for merge_tree

`file`

  tree file

`placements`

  reserve for jplace file to store placement information

`info`

  extra information, e.g. metadata, software version etc.

### Author(s)

guangchuang yu https://guangchuangyu.github.io

[Package treeio version 1.6.2 Index]