R version 3.5.0 Patched (2018-05-03 r74699)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Ubuntu 16.04.4 LTS

Matrix products: default
BLAS: /home/biocbuild/bbs-3.8-bioc/R/lib/libRblas.so
LAPACK: /home/biocbuild/bbs-3.8-bioc/R/lib/libRlapack.so

locale:
 [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C              
 [3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8    
 [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8   
 [7] LC_PAPER=en_US.UTF-8       LC_NAME=C                 
 [9] LC_ADDRESS=C               LC_TELEPHONE=C            
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C       

attached base packages:
[1] grid      stats     graphics  grDevices utils     datasets  methods  
[8] base     

other attached packages:
 [1] bindrcpp_0.2.2              cytofWorkflow_1.3.0        
 [3] multcomp_1.4-8              TH.data_1.0-8              
 [5] MASS_7.3-50                 survival_2.42-3            
 [7] mvtnorm_1.0-7               lme4_1.1-17                
 [9] Matrix_1.2-14               cowplot_0.9.2              
[11] Rtsne_0.13                  ConsensusClusterPlus_1.45.0
[13] FlowSOM_1.13.0              igraph_1.2.1               
[15] ComplexHeatmap_1.19.0       pheatmap_1.0.8             
[17] RColorBrewer_1.1-2          ggrepel_0.8.0              
[19] limma_3.37.1                dplyr_0.7.4                
[21] reshape2_1.4.3              ggridges_0.5.0             
[23] ggplot2_2.2.1               matrixStats_0.53.1         
[25] flowCore_1.47.2             readxl_1.1.0               
[27] knitr_1.20                  BiocStyle_2.9.1            

loaded via a namespace (and not attached):
 [1] Biobase_2.41.0       splines_3.5.0        assertthat_0.2.0    
 [4] highr_0.6            stats4_3.5.0         cellranger_1.1.0    
 [7] yaml_2.1.19          robustbase_0.93-0    pillar_1.2.2        
[10] backports_1.1.2      lattice_0.20-35      glue_1.2.0          
[13] digest_0.6.15        minqa_1.2.4          colorspace_1.3-2    
[16] sandwich_2.4-0       htmltools_0.3.6      plyr_1.8.4          
[19] pcaPP_1.9-73         XML_3.98-1.11        pkgconfig_2.0.1     
[22] GetoptLong_0.1.6     tsne_0.1-3           bookdown_0.7        
[25] corpcor_1.6.9        scales_0.5.0         tibble_1.4.2        
[28] BiocGenerics_0.27.0  lazyeval_0.2.1       magrittr_1.5        
[31] evaluate_0.10.1      nlme_3.1-137         BiocInstaller_1.31.1
[34] graph_1.59.0         tools_3.5.0          GlobalOptions_0.0.13
[37] stringr_1.3.1        munsell_0.4.3        cluster_2.0.7-1     
[40] compiler_3.5.0       rlang_0.2.0          nloptr_1.0.4        
[43] rjson_0.2.18         circlize_0.4.3       labeling_0.3        
[46] rmarkdown_1.9        codetools_0.2-15     gtable_0.2.0        
[49] rrcov_1.4-3          R6_2.2.2             zoo_1.8-1           
[52] bindr_0.1.1          rprojroot_1.3-2      shape_1.4.4         
[55] stringi_1.2.2        parallel_3.5.0       Rcpp_0.12.16        
[58] DEoptimR_1.0-8       xfun_0.1