Package: curatedTCGAData
Type: Package
Title: Curated Data From The Cancer Genome Atlas (TCGA) as
        MultiAssayExperiment Objects
Version: 1.6.0
Authors@R: c(person("Marcel", "Ramos", email = "marcel.ramos@roswellpark.org",
    role = c("aut", "cre")),
    person("Levi", "Waldron", email = "lwaldron.research@gmail.com",
    role = "ctb"),
    person("Lucas", "Schiffer", email = "schiffer.lucas@gmail.com",
    role = "ctb"),
    person("Ludwig", "Geistlinger", email = "ludwig.geistlinger@sph.cuny.edu",
    role = "ctb"),
    person("Valerie", "Obenchain", email = "valerie.obenchain@roswellpark.org",
    role = "ctb"),
    person("Martin", "Morgan", email = "martin.morgan@roswellpark.org",
    role = "ctb"))
Description: This package provides publicly available data from The Cancer
    Genome Atlas (TCGA) as MultiAssayExperiment objects.  MultiAssayExperiment
    integrates multiple assays (e.g., RNA-seq, copy number, mutation, microRNA,
    protein, and others) with clinical / pathological data.
    It also links assay barcodes with patient identifiers, enabling harmonized
    subsetting of rows (features) and columns (patients / samples) across the
    entire multi-'omics experiment.
License: Artistic-2.0
Depends: R (>= 3.5.0), MultiAssayExperiment
Imports: AnnotationHub, ExperimentHub, HDF5Array, S4Vectors, stats,
        SummarizedExperiment, utils
Suggests: BiocStyle, knitr, readr, rmarkdown, TCGAutils, testthat
VignetteBuilder: knitr
biocViews: Homo_sapiens_Data, ReproducibleResearch, CancerData,
        ExperimentHub
BugReports: https://github.com/waldronlab/curatedTCGAData/issues
RoxygenNote: 6.1.1
git_url: https://git.bioconductor.org/packages/curatedTCGAData
git_branch: RELEASE_3_9
git_last_commit: 0a31a05
git_last_commit_date: 2019-05-02
Date/Publication: 2019-05-07
NeedsCompilation: no
Packaged: 2019-05-07 16:29:05 UTC; biocbuild
Author: Marcel Ramos [aut, cre],
  Levi Waldron [ctb],
  Lucas Schiffer [ctb],
  Ludwig Geistlinger [ctb],
  Valerie Obenchain [ctb],
  Martin Morgan [ctb]
Maintainer: Marcel Ramos <marcel.ramos@roswellpark.org>
