\HeaderA{buildUpstreamSeqs2}{workflow component -- build an upstreamSeqs instance from a FASTA read}{buildUpstreamSeqs2}
\keyword{models}{buildUpstreamSeqs2}
\begin{Description}\relax
workflow component -- build an upstreamSeqs instance from a FASTA read
\end{Description}
\begin{Usage}
\begin{verbatim}
buildUpstreamSeqs2(fastaRead, organism="sce", provenance="harmen")
\end{verbatim}
\end{Usage}
\begin{Arguments}
\begin{ldescription}
\item[\code{fastaRead}] results of a readFASTA from Biostrings
\item[\code{organism}] string naming organism
\item[\code{provenance}] string or structure describing provenance
\end{ldescription}
\end{Arguments}
\begin{Details}\relax
generates an instance of upstreamSeqs
\end{Details}
\begin{Value}
generates an instance of upstreamSeqs
\end{Value}
\begin{Author}\relax
Vince Carey <stvjc@channing.harvard.edu>
\end{Author}
\begin{Examples}
\begin{ExampleCode}
# x = readFASTA(...)
# y = buildUpstreamSeqs2(x)
\end{ExampleCode}
\end{Examples}

