Package: ArrayExpressHTS
Title: ArrayExpress High Throughput Sequencing Processing Pipeline
Version: 1.6.0
Author: Angela Goncalves, Andrew Tikhonov
Maintainer: Angela Goncalves <filimon@ebi.ac.uk>, Andrew Tikhonov
        <andrew@ebi.ac.uk>
Description: RNA-Seq processing pipeline for public ArrayExpress experiments or local datasets
Depends: sampling, Rsamtools (>= 1.3.32), snow
Imports: Biobase, Biostrings, DESeq, GenomicRanges, Hmisc, IRanges,
        R2HTML, RColorBrewer, Rsamtools, ShortRead, XML, biomaRt,
        edgeR, grDevices, graphics, methods, rJava, stats, svMisc,
        utils
LinkingTo: Rsamtools
License: Artistic License 2.0
biocViews: RNAseq, Sequencing, HighThroughputSequencing
Packaged: 2012-03-31 08:06:00 UTC; biocbuild
Built: R 2.15.0; universal-apple-darwin9.8.0; 2012-03-31 11:50:09 UTC; unix
Archs: i386, ppc, x86_64
