Codelink-class          Class Codelink
CodelinkSet-class       Class CodelinkSet
CodelinkSetUnique-class
                        Class CodelinkSetUnique
SNR                     Calculate SNR
arrayNew                Create a new x11 device
arraySize               Determine the size of the array
as.matrix.Codelink      Return a matrix of intensity values
averageProbes           averageProbes
bkgdCorrect             Background correction of intensity values.
codelink.example        Dataset of class 'Codelink'
codelink.exprset        Dataset of class 'CodelinkSet'
createWeights           Create weight for Codelink chips
cutCV                   Calculate cutoff based in CV.
decDetect               Determine decimal type of Codelink files
dim.Codelink            Return the dimension of a Codelink object.
fc2Cond                 Select probes based on fold change calculation
imageCodelink           Image plot of Codelink arrays
logCodelink             Application of logCodelink to Codelink object
mergeArray              Merge Codelink Bioarrays Data
na2false                Set NAs to FALSE
normalize               Normalization wrapper for Codelink objects.
normalize.loess         Normalized chips using cyclic loess.
plotCV                  Plot of CV
plotCorrelation         Plot correlation scatterplot between two arrays
plotDensities           Plot Densities
plotMA                  MA plot
printHead               Print briefly a Codelink object
readCodelink            Read Codelink Bioarrays Data
readHeader              Read Header from Codelink Bioarrays Files
readHeaderXLS           Read Header from XLS exported Codelink
                        Bioarrays Files
reportCodelink          Write a report of genes selected in HTML
selCV                   Select based on CV cutoff.
writeCodelink           Write a Codelink object to file.
