Package: ArrayExpressHTS
Title: ArrayExpress High Throughput Sequencing Processing Pipeline
Version: 1.10.0
Author: Angela Goncalves, Andrew Tikhonov
Maintainer: Angela Goncalves <filimon@ebi.ac.uk>, Andrew Tikhonov
        <andrew@ebi.ac.uk>
Description: RNA-Seq processing pipeline for public ArrayExpress experiments or local datasets
Depends: sampling, Rsamtools (>= 1.3.32), snow
Imports: Biobase, Biostrings, DESeq, GenomicRanges, Hmisc, IRanges,
        R2HTML, RColorBrewer, Rsamtools, ShortRead, XML, biomaRt,
        edgeR, grDevices, graphics, methods, rJava, stats, svMisc,
        utils, sendmailR, bitops
LinkingTo: Rsamtools
License: Artistic License 2.0
biocViews: RNAseq, Sequencing, HighThroughputSequencing
Packaged: 2013-04-11 03:47:38 UTC; biocbuild
Built: R 3.0.0; x86_64-apple-darwin10.8.0; 2013-04-11 07:49:39 UTC; unix
