ArrayExpressHTS         ExpressionSet for RNA-Seq experiment submitted
                        in ArrayExpress and ENA
ArrayExpressHTSFastQ    ExpressionSet for RNA-Seq raw data files
getDefaultFilteringOptions
                        Functions to work with ArrayExpressHTS
                        processing options
getPipelineOptions      Functions to work with package level options
isRCloud                Check the code is running on R-Cloud
prepareAnnotation       Prepare annotation data for the RNA-Seq
                        Pipeline
prepareReference        Prepare reference data for the RNA-Seq Pipeline
