BitSeq-package	BitSeq-package
BitSeq	BitSeq-package
estimateDE	estimateDE
estimateExpression	estimateExpression
estimateExpressionLegacy	estimateExpression
estimateHyperPar	estimateHyperPar
getDE	getDE
getExpression	getExpression
getGeneExpression	getGeneExpression
getMeanVariance	getMeanVariance
getWithinGeneExpression	getGeneExpression
loadSamples	loadSamples
parseAlignment	parseAlignment
tri.file.hasGeneNames	transcriptInfoFile
tri.file.setGeneNames	transcriptInfoFile
tri.hasGeneNames	transcriptInfo
tri.load	transcriptInfo
tri.save	transcriptInfo
tri.setGeneNames	transcriptInfo
writeSamples	loadSamples
